Extensions to 'ggplot2' respecting the grammar of graphics paradigm. Statistics: locate and tag peaks and valleys; label plot with the equation of a fitted polynomial or other types of models including major axis, quantile and robust and resistant regression. Labels for P-value, R^2 or adjusted R^2 or information criteria for fitted models; parametric and non-parametric correlation; label with ANOVA table for fitted models; label with summary table for fitted models; annotations for multiple comparisons with adjusted P-values. Model fit classes for which suitable methods are provided by package 'broom' and 'broom.mixed' are supported as well as user-defined wrappers on model fit functions. Scales and stats to build volcano and quadrant plots based on outcomes, fold changes, p-values and false discovery rates.
Version: | 0.6.2 |
Depends: | R (≥ 4.0.0), ggpp (≥ 0.5.8) |
Imports: | grid, stats, ggplot2 (≥ 3.5.0), scales (≥ 1.3.0), rlang (≥ 1.1.3), generics (≥ 0.1.3), MASS (≥ 7.3-60.0.1), confintr (≥ 1.0.2), polynom (≥ 1.4-1), quantreg (≥ 5.97), lmodel2 (≥ 1.7-3), nlme (≥ 3.1-160), splus2R (≥ 1.3-5), multcomp (≥ 1.4-25), multcompView (≥ 0.1-10), tibble (≥ 3.2.1), plyr (≥ 1.8.9), dplyr (≥ 1.1.4), lubridate (≥ 1.9.3), caTools (≥ 1.18.3) |
Suggests: | knitr (≥ 1.45), rmarkdown (≥ 2.25), ggrepel (≥ 0.9.5), broom (≥ 1.0.3), broom.mixed (≥ 0.2.9.5), gginnards (≥ 0.1.0-1), ggtext (≥ 0.1.2), robustbase (≥ 0.99-4-1), testthat, vdiffr |
Published: | 2025-07-08 |
DOI: | 10.32614/CRAN.package.ggpmisc |
Author: | Pedro J. Aphalo |
Maintainer: | Pedro J. Aphalo <pedro.aphalo at helsinki.fi> |
BugReports: | https://github.com/aphalo/ggpmisc/issues |
License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
URL: | https://docs.r4photobiology.info/ggpmisc/, https://github.com/aphalo/ggpmisc |
NeedsCompilation: | no |
Materials: | README NEWS |
CRAN checks: | ggpmisc results |
Reference manual: | ggpmisc.pdf |
Vignettes: |
Fitted-Model-Based Annotations :: Cheat Sheet (source, R code) Fitted-Model-Based Annotations (source, R code) |
Package source: | ggpmisc_0.6.2.tar.gz |
Windows binaries: | r-devel: ggpmisc_0.6.1.zip, r-release: ggpmisc_0.6.2.zip, r-oldrel: ggpmisc_0.6.2.zip |
macOS binaries: | r-release (arm64): ggpmisc_0.6.2.tgz, r-oldrel (arm64): ggpmisc_0.6.2.tgz, r-release (x86_64): ggpmisc_0.6.2.tgz, r-oldrel (x86_64): ggpmisc_0.6.2.tgz |
Old sources: | ggpmisc archive |
Reverse imports: | CEMiTool, CRMetrics, explainer, forestmangr, ggquickeda, hydroroute, methylclock, neutralitytestr, qPCRtools, RQdeltaCT, shinyTempSignal, simET, teal.modules.general, visa |
Reverse suggests: | chem16S, coveffectsplot, MetaNet, pcutils, rTwig |
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